Literature notes
- 2-interval Problems
- 3 ways the brain creates meaning
- A job shop scheduling problem in software testing
- A kinder, gentler philosophy of success
- A new learning paradigm: competition supported by technology
- Abraham2007
- ADSC
- Albuquerque2004
- Algorithm for finding maximum clique
- Alignment free multiple sequence analysis
- Alignment of LC-MS peak list for correction of retention time
- Altenhoff2009
- Analyzing stacks of images using copula concept
- Ancestral reconstruction over continuous characters and distributions
- Angibaud2008b
- API designs matters
- Application of Komogorov complexity
- Application of Multifractal analysis for image analysis
- Applying the neutral indel model across metazoan genomes
- Approximation algorithms for the Graph Orientation Minimizing the Maximum Weighted Outdegree
- Approximation of Bookmark Assignment
- Arithmetic operations on regular languages
- Arora2005
- Art of solving minimal problems
- ASP-Complete Problems
- Auction with purchase probability
- Baker2009
- Balcan2009
- Bambery2004
- Bansal2010
- Bardera2009
- Bayesian Agglomerative Clustering with Coalescents
- BBC Cats
- Beautiful Teams
- Beekes2007
- Bender2004
- Bentley1984
- Bentley1993
- Berard2008
- Bernt2008
- Bertrand2008
- Beyond Satisfiability
- Biocomputing Startups in Singapore
- Biologically inspired computer networks
- Biomolecular systems and their evolution
- Blin2006
- Blin2009
- Bocker2008
- Boucher2010
- Boyer1981
- Boyer2004
- Brain Rules
- Breakpoint reuse rate in rearrangement scenarios
- Brown2010a
- Brown2010b
- Burgetz2006
- Calabrese2003
- CAMBer
- Cannibal Animal Game
- Carpentier2005
- Cell Illustrator Online for Systems Biology Platform
- Centroid Triangulations to bivariate BSplines
- Change-Up in Lectures
- Chauve2006
- Chauve2008
- Chen2007
- Chen2008
- Clean Code
- Cloning as a software engineering tool
- Code clone analysis and applications
- Code clone analysis
- Combinatorial problems in genomics and computational biology
- Composability in Computing
- Computational drug target gene discovery
- Computational Manga
- Computational methods for prediction of alternative promoters and TFBS
- Computer Assisted Surgical Planning
- Computers and Genomes
- Conceptual Blockbusting
- Conditional random field
- Conservation and Evolution of Regulatory Elements in Mammalian Genomes
- Corban2010
- Costello2008
- Cryptographic Hashing
- On the Cruelty of Really Teaching Computer Science Redux
- Csuros2010
- Data Intensive Scalable Computing
- Data mining at I2R
- Data structures for summary queries
- Data Linkage Problem
- Decision support system
- Dehal2005
- Detecting complexes from PPI
- Detecting gene duplication through reconciled trees
- Detecting lateral gene transfer using pairwise distances
- Disambiguation in DL
- Distributed Streaming
- Distribution Deposition Algorithm
- DNA methylation
- Domain Engineering
- Domination Number
- Don Norman on creating great software
- Don’t be such a scientist
- Dong2010
- Double water exculsion
- Doyon2008
- Drive: The surprising truth about what motivates us
- Drug pathway decipherer
- Drupal Founder visit
- Du2003
- Durand2003a
- Durand2003b
- Durand2006
- Dy2004
- Dynamic Graph problems
- Dziuba2007
- Eisenhaber2010
- Intro to Encryption
- Ensemble Clustering of PPI Networks
- Epigenomics of murine and adipose cells
- EUPathDB
- Evolution of duplicates in Yeast
- Evolution of regulatory modules
- Explorative visualisation of usage log data
- Extracting and Exploiting Contrastive Relations from Biomedical Literature
- Fernandez2005
- Fitch2000
- Flow monitoring problem
- Formula size complexity
- Fragile Breakage Model
- Fragilities in Cellular Networks
- Fragment HMM: Protein structure prediction
- Franceschini2007
- Fujibuchi2000
- Fulton2006
- Fuzzy Logic and Inexact Reasoning
- Game tree search
- Geekcamp 2011
- Geekcamp.SG 2012
- GEMS2
- Gene Identifcation
- GeneMANIA
- Genetic Algorithms
- Genomic Data Assimilation for Discovering New Knowledge Regarding Biological Pathways
- Genomic sources of regulatory evolution
- Google DevFest 2011
- Grammar based compression of reptitive text
- Grand Challenges in Computing IDM
- Graph Kernels
- Groves2003
- Gupta2010
- Hackers and Painters
- Han2009
- Helm1991
- Hidden common cause relations in relational learning
- Hierarchical POMDP controller optimization by likelihood maximization
- History of computing
- Hoberman2007
- How to win friends and influence people
- HP Labs Singapore
- Hub set problem
- Hulsen2006
- Hulsen2006b
- Hurst2004
- Identification With Lies
- Identifying drug pathway
- If you want to write
- Image Based Regression
- Imaging Spectroscopy and Spectral Unmixing
- Infographics
- Invariants in Computing
- Irredundant Motifs
- Istrail2010
- IT Productivity
- Jiang2002
- Jinjun2009
- JobsConnect Briefing
- Joel on Software
- Klimke2009
- KOEI recruitment talk
- Kohler2007
- Kretlow2006
- Kuzniar2008
- Large-Scale Gene Network Estimation
- Lasch2004
- Leardi2000
- Learning PWN from Sequence and Expression Data
- Learning Robots
- Learning to Walk through Imitation
- Lee2008
- Lehr1985
- Lemoine2007
- Lerat2003
- Linear Programming
- Linear Ordering Problem
- Lipidomics
- Liu2006
- Local Motifs
- Louie2009
- Low power networking for wireless sensor networks
- LTL vs CTL
- Made to Stick
- Mapping of structural variants using functional genomics
- Math Aware Search
- Mathematics of luxury
- Matusewicz2005
- Max’s master thesis presentation
- Maximum edge domination problem
- McLysaght2002
- Merkle2010
- Mining data stream
- Mining Communities from PPI
- Mining Frequent Patterns
- Mining PPI Networks
- Misra1982
- Modelling dynamic of cellular signaling using a probabilistic approach
- Modelling Uncertainty
- MS Research Asia: first ten years
- Multi-Dimensional Views in the ‘Omics’ Era
- Multi-Robot Adaptive Exploration and Mapping for Environmental Sensing Applications
- Multi-stage iterative thresholding for binarization of documents
- Murzin2010
- Mystery of intron splicing
- Gai2003
- News from the RNA world
- One class per named entity
- Operons
- Ozery-Flato2008
- Pairwise compatibility graph
- Pandu Rangan on teaching algorithms
- Parallelization of DFA membership tests
- Parida2010
- Pattern discovery from graph structured data
- Pearson1994
- Peopleware
- PepSOM
- Peptide and PTM identifcation by MS/MS
- Pertea2008
- Petibois2006
- Petibois2007
- Petsko2001
- Phenotype-Genotype networks
- Phylogenetic Networks
- Planning and control in belief space
- Point Based Methods
- POST in Prolog
- Posters from GIW 2009
- Practices of an agile developer
- Pragmatic thinking and learning
- Predictably irrational
- Predicting biological function at different spatial scales
- Predicting pathogenicity of missense mutations
- Prefix free regular expression
- Presentation Zen
- Presentation Zen Design
- Presentation Tips
- Probase
- Problem solving and modelling with Graphs
- Producing open source software
- Programmers at Work
- Progressive Query Processing
- Protein complex prediction
- Protein complex prediction from cores/attachments model
- Protein Flexibility
- Public speaking
- Qi2009
- Qian2008
- QIP = PSPACE
- Quartet SuperTree Construction
- Quiet leadership
- Rahmann2006
- Rajan2010
- Randomization in CS
- Ranking and unranking of parenthesis strings
- Reconstructing string from substrings using quantum queries
- Reconstructing the evolutionary history of mammalian genomes
- Reconstructing Ancestral Genomes
- Register Allocation by Puzzle Solving
- Remarks on cluster systems
- Research in the Singapore Infocomm Industry
- Research – A Rewarding Career, and Opportunities at IHPC and A*STAR
- RielMehan2010
- Rise of the Internet
- Robust 1-center on trees
- Rogozin2004
- Rosenberg2007
- Roth2008
- Ryvkin2008, Jun2008
- Sahu2005
- Sankoff1997
- Sankoff2001
- Sankoff2005a
- Sankoff2005b
- Sankoff2008
- SAP and disease association
- SAT and P vs NP
- Scan statistics
- Scharpf2006
- Scheer2007
- Schmidt2004
- Schmidt2007
- Schulze2005
- Secret Handshakes
- Selected papers in CS
- Sequence composition based on K-string composition
- Set bipartite matching problem
- She2009
- Ship it
- Shotgun proteonomics
- Siepel2002
- Simillion2004
- Skurichina2006
- slide:ology
- Snel2002
- SNPs
- Soft Computing in Bioinformatics
- Software specification discovery
- Software Cost Model
- Software Verification overview
- Software Freedom Day 2011
- Sorting and Convex Hull
- SQL to Prolog
- Starck2001
- Startup Weekend 2012
- Statistical Analysis of high dimensional molecular data
- Statistical Analysis in Bioinformatics
- Stochastic approximation of signalling pathway dynamics
- StOnge2005
- Streaming Geometry Processing
- Streaming meshes
- Stumbling on Happiness
- Sudoku solver
- Super Crunchers
- Symposium on Math and Science in IDM
- Sync sink sync
- Synteny, Orthology and Evolution of Gene Clusters
- Talent scheduling minimizing idle days
- Teaching JavaScript
- The Agile Samurai
- The Art of Lean Software Development
- The non-designer’s design book
- The Paleo Diet
- The Passionate Programmer
- The power of abstraction
- The Skillful Teacher
- The Visual Display of Quantitative Information
- Topological approaches to tree reconstruction
- Tracing the evolution of protein interaction networks
- Tracking Multiple Objects
- Tracking and Searching
- Translational discoveries in multiple myeloma
- Turan type problems
- Ultraconservation and ultradivergence of human DNA sequences
- Uncovering the architecture of coordinated gene expression
- Using SVM to predict PPI
- Using Trac/SVN
- Verzakov2004
- View projection
- Viki
- Vilella2009
- VSee
- Wall2003
- Warner1997
- Windowed Time Warping
- Wolf2001
- Wolfe1997
- Wood2004
- Writing for academic publication
- Xiaowen2010
- Xu2008
- Yancopoulos2008
- Yang2008
- Yang2010
- Yongjin2010
- Yosef2008
- Your Brain at Work
- Zerbino2008
- Zero space data structure
- Zhang2007
- O(n lg n) time algorithm for GTT
- Failure: a love story
- CouchDB @ Moneythor
- The Wide Lens
- Practice 2013: The Art of Strategy
- Team Geek
- Interactive Auralization with real time sound sources
- Exercism.io with Katrina Owen
- Hoodie, implementation of No Backend spec
- From hack to hacker by Terence Lee
- Product analytics by Cedric Chin
- Warren Specter practice 2013
- Functors from a mathematical perspectives
- Understanding the log abstraction
- Deconstructing Functional Programming - Gilad Bracha
- Pairing vs Code review
- Hack and tell [2014-01-28 Tue 20:00]
- Nine algorithms that changed the future
- Bitcoin mining with FPGA
- Spanner talk at Friday Hacks
- DNS cache poisoning
- Implementing continuous delivery
- Continuous delivery in the cloud
- Web performance at Facebook
- Bazaarvoice’s service oriented architecture
- MySQL training by Iris
- Game programming patterns
- DNS security
- Viki web services
- Design patterns in Drupal
- Program design in the UNIX environment
- Field guide to the algorithmic interview
- Internship at Groupon
- What actually happens during internships
- Hack and tell [2014-03-11 Tue 20:00]
- Automated reasoning for software bug finding
- What’s new in JaveSE 8
- Lessons from building NUSmods 2.0
- Jenkins automation
- Into the Deep (Blue)
- Magarena lightning talk
- Beyond hearbleed
- Detecting communities in large social networks
- Hyperlinking videos for large video collections
- Discovering association between variables in data
- Integrating data mining in business process
- Machine learning for Big Data analysis
- How does the visually impaired dream?
- Geospatial technologies
- Location analytics
- Mining geospatial data
- Indexing the world with aerial drones
- Introduction to data.gov.sg
- Matt Mullenweg Live
- Mapping urban spaces
- Geospatial startup: Adnear
- Geospatial startup: Dilivrit
- Kopi chat with Ray Chan, 9gag
- The law and aaron - could it happen in Sinagapore
- Comments by Vikram after film on AaronSW
- Comments by Eleanor after film on AaronSW
- Hot streaming replication in Postgres 9.3
- Competitive gaming: a whole new world
- 2D game art
- REST API best practices
- Pursuit of happiness
- Software teams in global finance
- The Anatomy of a Search Engine
- 1 year as a digital nomad
- To ship or not to ship
- Trillions
- Optimising underwater modems
- Semantic media mining: what? why? how?
- GrabTaxi @ techfest
- Environmental modelling with machine learning
- Introduction to scikit-learn
- Organising programs without classes
- A mathematical theory of communication
- Barcamp 2014
- How we do 60fps in our 3d RTS mobile game
- Underwater autonomous vehicle
- Hardware Prototyping 101
- Tales of an InfoStealer
- Inappropriate applications of NFC
- Introduction to Docker
- Overview and evaluation of Bluetooth LE
- Communicating Sequential Processes
- Distributed computing for new blood
- Free Wheatley, breathing life into iconic figurines
- Agent-based modelling in Ruby
- Tech adventures of a lousy Gamer
- ES6 - the future of javascript
- Making hardware come alive
- The last great hardware show
- Hardware and algorithm design for drones
- Singapore’s Smart Nation journey
- Cloudera talk
- Using data at DBS
- Data science pecha kucha
- Investor: friend or foe
- Tech hiring
- ShadowCrypt
- Security applications of Formal Language Theory
- Consistent hashing and random trees
- Game balance in Skyrim
- Science: Humanity’s Universal Bridge
- Configurations with consul
- Docker internals
- Correlation between IT and sales
- The absolute minimum every software developer needs to know about database indexes
- twiz.io
- Learning Haskell and using Yesod
- Engineers.SG meetup
- Know your threat landscape
- Optimizing bus routes from ezlink data
- Web instructure at Dropbox
- Open source hardware: future trends
- systemd: where we come from and where we want to go in 2015
- How LiMux serves 15000
- MariaDB: state of the base
- Firefox OS: open web mobile platform
- loklak: distributed tweet search engine
- Cutting through the container hype
- Open source monitoring with icinga
- Open Data and Open Source
- Using mobile phones for IoT
- Open source and open data for China Gov
- Collaborate with ease and confidence
- Create once, publish everyone
- Clash: structure descriptions of synchronous hardware using haskell
- Purely functional deployments with Nix
- Functional Reactive Programming on iOS
- Web Developer’s Nightmare
- Teleport, an intelligent routing service
- Best practices in Best practices
- Node.js for multiplayer mobile game
- Design, test, prototype in 12 days
- hpack: an alternative format for haskell packages
- Haskell on ARM with ghc
- getopt-generics
- The Derivative of a Regular Type is its Type of One-Hole Contexts
- Hack and Tell 2015-07-02 2000
- Any angle path finding on grids
- F2P Design: from WTF to Awesome
- using alpine linux to create smaller docker images
- Intro to Linux
- Julia at the frontier: fast, flexible, fun
- VR educational games
- The Linux scheduler: a decade of wasted cores
- Debugging Javascript without console.log
- Tic-Tac-Toe with React Native and SocketIO
- Javascript on the JVM
- Autonomous Vehicles: advances, algorithms, and the road ahead
- Autonomous Vehicles for Mobility on Demand
- Diving into Open Source
- HyperLedger project: updates from the blockchain
- Play | Game | Fail
- Future of the game industry
- Designing for Performance
- Singapore Indies Meetup
- Probably approximately correct
- Scientific computing using Cython
- Hack and Tell 2017-07-18
- Hack and tell [2017-09-19 Tue 19:09]
- Taking back “Software Engineering”, craftsmanship is not enough
- Hack and Tell Singapore
- Teaching Python to working adults
- Hack and tell 2018-07-05
- Making good salad
- operant conditioning
- shoulder massage
- Removing barriers to increase developer productivity
- Hack and Tell 2019
- PyConSG Education summit 2019
- Learning Day 67
- Learning Day 67.5
- Learning Day 68
- Learning Day 71.5
- Learning Day 73
- Learning day 74.5
- Learning Day 77
- Learning Day 79
- Learning Day 80.5
- Learning Day 81.0
- Learning Day 107.5
- Learning Day 109.5
- Career chats @Swiss 2022
- The combinatorial invariance conjecture and machine learning
- PyConSG Education summit 2022
- underwater robotics
- The Elephant in the Brain: Hidden Motives in Everyday Life