Gene Identifcation

CREATED: 200701090455 Author: Phoebe Chen ** Promoter identification in Prokaryote Genomic Context

• high no of false positives in current tools
• motivation => reduce false positives, narrow signal detection
• use pHMM and ANN

** Genefinder with predicted exon taxonomy

• common inaccurate patterns in existing gene finder ** identified 13 types of exon classification
• only 4 exon tpyes, single, initial, internal, terminal
• exons also exist in untranslated regions