Melvin's digital garden

Sankoff2008

CREATED: 200810200332 Title: Internal Validation of Ancestral Gene Order Reconstruction in Angiosperm Phylogeny

  • Distance = Number of genes - number of cycles
  • whole genome duplication (Tetraploidization) ** WGD, followed by rearrangement and gene loss
  • genome halving (reverse of WGD), can be solved in O(n) time/space but have multiple solutions
  • guided genome halving using outgroup

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